Database for CRISPR/Sp-Cas9 off-target assays


We invite submissions of comma separated text files containing the following columns, to be included in the crisprSQL database:

  1. cell line / tissue

  2. genome assembly

  3. chromosome

  4. start base pair of (off-)target locus

  5. end base pair of (off-)target locus

  6. 23bp guide RNA sequence

  7. 23bp (off-)target strand DNA sequence

  8. observed cleavage frequency (0..1)

Please also supply metadata about your publication. The maximum file size is 10 MB.

Upload csv file

crisprSQL is developed at Oxford University, 2020 – 2022